We have the SOLUTIONS to meet your BIOINFORMATICS needs When it comes to developing custom pipelines, implementing the most cutting edge analyses & profiling techniques, we work with our clients to ensure their informatics needs are met. Whether implementing a sofisticated analysis method, designing a custom analysis pipeline, utilizing cutting-edge machine learning techniques for biomarker classification, or simply producing publication-ready figures, our staff combines years of experience with highly qualified personnel to meet your every need.
Data Acquisition and Basic Analyses: Illumina
Illumina Miseq Reporter Software The MiSeq system is the first desktop sequencer to offer a fully integrated sequencing ecosystem and provides automated downstream secondary analysis following basecalling by the MiSeq system. After defining a workflow in Illumina’s Experiment Manager, the MiSeq Reporter software launches automatically post-sequencing to perform a variety of anlyses: library QC, demultiplexing, generation of FASTQ files, alignment, variant detection, and VCF generation.
Data Acquisition and Basic Analyses GeneChip® Command Console® (AGCC)
AGCC is the latest generation of instrument control software for GeneChip systems. The Command Console® software provides an intuitive set of tools for instrument control and data management used in the processing of GeneChip Arrays. Genome Explorations uses the AGCC suite for automated data collection and instrument control with the GeneChip® Fluidics Station 400 and the GeneChip® Scanner 3000.